| Tuesday, 4 May 2021 |
| EBRAINS Infrastructure Training on Model Validation
In case of any organisational/technical issues, please contact:
training-support@humanbrainproject.eu
Virtual meeting information:
- This is an online Zoom Training (live talks, demos, hands-on tutorials, Q+A)
- The Zoom video client software (free of charge, available for Windows, Mac, and Linux and also for iOS and Android) is required
Registration:
- To register for this training event, an EBRAINS account is needed. EBRAINS registration is free of charge.
- With your EBRAINS login credentials, you are able to register to this training event on Model Catalog and Validation Framework (also free of charge)
- [Link to Registration] Registration is closed since 30 April 2021!
- Registration deadline: 30 April 2021, 5pm (CET)
Meeting Login:
- Meeting start time is 2pm
- The Waiting room opens at 1:45pm
Times in the agenda are in shown in Central European Summer Time (e.g. Berlin) and UTC. You can also show e.g.: USA, Australia, Japan, China, India, ...)
Please note: The order and timing of the talks and sessions is now in final version!
.
|
CEST: 14:00
UTC: 12:00
| Part 1: Talks, Demos & Tutorials – Theory + Jupyter Notebook walkthroughs
- Part 1 is for all interested to get a basic overview about EBRAINS and more theoretical in-depth knowledge to a specific service category EBRAINS is offering. This is followed by practical Jupyter Notebook walkthroughs and introduction to a suite of tools offering new capabilities for your own research.
|
CEST: 14:00‑14:25
UTC: 12:00‑12:25
(25+5 min) | | Welcome to the Training - Getting started (Talk) Link to chat channel | Andrew Davison (cnrs) |
CEST: 14:30‑14:40
UTC: 12:30‑12:40
(10 min) | | Introduction to EBRAINS (Talk) Link to chat channel | Andrew Davison (cnrs) |
CEST: 14:40‑14:50
UTC: 12:40‑12:50
(10 min) | | EBRAINS Service "Data and Knowledge" (Talk) Link to chat channel | Ida Aasebø (UIO) |
CEST: 14:50‑15:00
UTC: 12:50‑13:00
(10 min) | | EBRAINS Service "Simulation" (Talk) Link to chat channel | Susanne Kunkel (nmbu) |
CEST: 15:00‑15:40
UTC: 13:00‑13:40
(40+5 min) | | Present Web Apps - Models and Tests (Talk + Demo)
- UseCase: viewer -> view models & tests on app; Model Curation
Link to chat channel | Andrew Davison (CNRS) |
CEST: 15:45‑16:00
UTC: 13:45‑14:00
(15 min) | | Break |
CEST: 16:00‑16:55
UTC: 14:00‑14:55
(55+5 min) | | SciUnit Framework (Talk + Demos)
Link to chat channel | Rick Gerkin (ICON Lab, ASU) |
CEST: 17:00‑17:15
UTC: 15:00‑15:15
(15 min) | | Break
- Group Foto (Zoom Screenshots)
|
CEST: 17:15‑18:55
UTC: 15:15‑16:55
(100+5 min) | | SciUnit Framework Practice (Hands-on)
- Sample model and test implementation
Link to chat channel | Shailesh Appukuttan (CNRS) |
CEST: 19:00
UTC: 17:00
| End of Day 1 |
| Wednesday, 5 May 2021 |
CEST: 14:00
UTC: 12:00
| Training on Model Validation - Continue on Part 1 - Day 2
Talks, Demos & Tutorials – Theory + Jupyter Notebook walkthroughs
Part 1 is for all interested to get a basic overview about EBRAINS and more theoretical in-depth knowledge to a specific service category EBRAINS is offering. This is followed by practical Jupyter Notebook walkthroughs and introduction to a suite of tools offering new capabilities for your own research.
|
CEST: 14:00‑14:40
UTC: 12:00‑12:40
(40+5 min) | | Creating and Using a Test Package (Demo)
- Packaging the tests created in SciUnit hands-on session
and publishing it on PyPI
Link to chat channel | Shailesh Appukuttan (CNRS) |
CEST: 14:45‑15:25
UTC: 12:45‑13:25
(40+5 min) | | Present Web App - Models and Tests (Hands-on)
- UseCase: developer --> create, edit models & tests on app using models from SciUnit hands-on
Link to chat channel | Shailesh Appukuttan (CNRS) |
CEST: 15:30‑15:45
UTC: 13:30‑13:45
(15 min) | | Break |
CEST: 15:45‑16:40
UTC: 13:45‑14:40
(55+5 min) | | VF Python Client (Hands-on)
- Register models, tests created in SciUnit hands-on & running tests, handling results
Link to chat channel | Shailesh Appukuttan (CNRS) |
CEST: 16:45‑17:25
UTC: 14:45‑15:25
(40+5 min) | | Overview of HippoUnit (Talk + Demo)
- Present tests - dev aspects, results briefly, utility
Link to chat channel | Sára Sáray (ELKH) |
CEST: 17:30‑18:00
UTC: 15:30‑16:00
(30 min) | | Break |
| Part 2: Diving into the details…
- Each person/group gives a short overview of own/assigned model and the validations intended to be implemented during this session
- Actively implementing validation tests – either on your own model or models provided by us
|
CEST: 18:00‑18:55
UTC: 16:00‑16:55
(55+5 min) | | Flash Introductions - Each Model applicant
- Present model, data, tests to be implemented
Link to chat channel | Each model applicant |
CEST: 19:00‑19:25
UTC: 17:00‑17:25
(25+5 min) | | Wrap-up and discussion (Talk) Link to chat channel | Andrew Davison (cnrs) |
CEST: 19:30
UTC: 17:30
| End of Day 2 |
Human Brain Project
